「ハプログループD (mtDNA)」の版間の差分

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'''ハプログループD (mtDNA)'''(ハプログループD (ミトコンドリアDNA)、{{Lang-en-short|Haplogroup D (mtDNA)}})とは、[[分子人類学]]で用いられる、[[人類]]の[[ミトコンドリアDNAハプログループ]](型集団)の分類のうち、[[ハプログループM (mtDNA)|ハプログループM]]を祖先に持ち「4883 5178A 16362」により定義されるものである<ref>van Oven, Mannis; Manfred Kayser (13 Oct 2008). "Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation". Human Mutation 30 (2): E386–E394. doi:10.1002/humu.20921. PMID 18853457. Retrieved 2009-05-20.</ref>。48000年前に東アジアで誕生した<ref>"Correcting for Purifying Selection: An Improved Human Mitochondrial Molecular Clock Supplementary material" (PDF). 2009. pp. page89.</ref>。
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{{テンプレート:20180815sk}}
 
 
==分布==
 
ハプログループDは[[東アジア]]、[[東南アジア]]、[[北アジア]]、[[中央アジア]]そして[[アメリカ大陸]]に至るまで広範囲に観察される。[[形質人類学]]における[[モンゴロイド]]の分布域と概ね重なる。[[日本人]]の約41%-42%がこの系統に属し<ref>Asari 2007</ref><ref>Umetsu 2005</ref><ref>Maruyama 2003</ref>、うち下位のD4系統は日本人の30%以上が属す最も高頻度のグループとなっている。
 
 
 
==下位系統==
 
*D
 
**'''D4''' (3010, 8414, 14668) :[[北東アジア]]よくみられ、[[日本人]]、[[琉球民族|琉球人]]、[[朝鮮民族|朝鮮人]]、[[モンゴル人]]、[[ツングース系民族]]などでは最も高頻度で観察されるタイプである<ref name = "Maruyama2003">Sayaka Maruyama, Kiyoshi Minaguchi, and Naruya Saitou, "Sequence polymorphisms of the mitochondrial DNA control region and phylogenetic analysis of mtDNA lineages in the Japanese population", ''Int J Legal Med'' (2003) 117 : 218–225. DOI 10.1007/s00414-003-0379-2</ref><ref name = "Umetsu2005">Kazuo Umetsu, Masashi Tanaka, Isao Yuasa ''et al.'', "Multiplex amplified product-length polymorphism analysis of 36 mitochondrial single-nucleotide polymorphisms for haplogrouping of East Asian populations", ''Electrophoresis'' (2005), 26, 91–98. DOI 10.1002/elps.200406129</ref><ref name = "Derenko2012" /><ref>[http://www.ncbi.nlm.nih.gov/pubmed/17058303 East Asian mtDNA haplogroup determination in Koreans: haplogroup-level coding region SNP analysis and subhaplogroup-level control region sequence analysis]</ref><ref name = "Kong2003">Qing-Peng Kong, Yong-Gang Yao, Mu Liu ''et al.'', "Mitochondrial DNA sequence polymorphisms of five ethnic populations from northern China", ''Hum Genet'' (2003) 113 : 391–405. {{doi|10.1007/s00439-003-1004-7}}</ref><ref name = "Asari2007">Asari M ''et al.'', "Utility of haplogroup determination for forensic mtDNA analysis in the Japanese population", ''Leg Med'' (2007), doi:10.1016/j.legalmed.2007.01.007</ref><ref name = "Zheng2011">Zheng H-X, Yan S, Qin Z-D, Wang Y, Tan J-Z, et al. 2011 Major Population Expansion of East Asians Began before Neolithic Time: Evidence of mtDNA Genomes. PLoS ONE 6(10): e25835. {{doi|10.1371/journal.pone.0025835}}</ref> 。[[ブリヤート]]、[[カルムイク人]]、[[テレンギト人]]、[[カザフ人]]などでも最もよく見られるタイプである<ref name = "Derenko2012">Derenko M, Malyarchuk B, Denisova G, Perkova M, Rogalla U, ''et al.'' (2012), "Complete Mitochondrial DNA Analysis of Eastern Eurasian Haplogroups Rarely Found in Populations of Northern Asia and Eastern Europe." ''PLoS ONE'' 7(2): e32179. doi:10.1371/journal.pone.0032179</ref><ref name = "Derenko2007">Miroslava Derenko, Boris Malyarchuk, Tomasz Grzybowski ''et al.'', "Phylogeographic Analysis of Mitochondrial DNA in Northern Asian Populations", ''Am. J. Hum. Genet.'' 2007;81:1025–1041. DOI: 10.1086/522933</ref>。[[中国]]、[[東南アジア]]、[[シベリア]]、[[中央アジア]]、[[アメリカ先住民]]で広く観察される<ref name = "Malhi2004">Ripan S. Malhi, Katherine E. Breece, Beth A. Schultz Shook, and Frederika A. Kaestle, "Patterns of mtDNA Diversity in Northwestern North America", ''Human Biology'', Volume 76, Number 1, February 2004, pp. 33-54. DOI: 10.1353/hub.2004.0023</ref><ref name = "Malhi2003">Ripan S. Malhi, Holly M. Mortensen, Jason A. Eshleman ''et al.'', "Native American mtDNA Prehistory in the American Southwest", ''American Journal of Physical Anthropology'' 120:108–124 (2003)</ref><ref name = "Wen2005">Bo Wen, Hui Li, Song Gao ''et al.'', "Genetic Structure of Hmong-Mien Speaking Populations in East Asia as Revealed by mtDNA Lineages", ''Mol. Biol. Evol.'' 22(3):725–734. (2005) doi:10.1093/molbev/msi055</ref><ref name = "Hill2006">Catherine Hill, Pedro Soares, Maru Mormina ''et al.'', "Phylogeography and Ethnogenesis of Aboriginal Southeast Asians", ''Mol. Biol. Evol.'' 23(12):2480–2491. (2006) doi:10.1093/molbev/msl124</ref><ref name = "Hill2007">Catherine Hill, Pedro Soares, Maru Mormina ''et al.'', "A Mitochondrial Stratigraphy for Island Southeast Asia", ''Am. J. Hum. Genet.'' (2007);80:29–43.</ref><ref name = "Kaewsutthi2011">Supannee Kaewsutthi, Nopasak Phasukkijwatana, Yutthana Joyjinda ''et al.'', "Mitochondrial Haplogroup Background May Influence Southeast Asian G11778A Leber Hereditary Optic Neuropathy", ''Invest Ophthalmol Vis Sci.'' 2011 Jul 1;52(7):4742-8. doi: 10.1167/iovs.10-5816</ref><ref name = "Volodko2008">Natalia V. Volodko, Elena B. Starikovskaya, Ilya O. Mazunin ''et al.'', "Mitochondrial Genome Diversity in Arctic Siberians, with Particular Reference to the Evolutionary History of Beringia and Pleistocenic Peopling of the Americas", ''The American Journal of Human Genetics'' 82, 1084–1100, May 2008. DOI 10.1016/j.ajhg.2008.03.019.</ref>。
 
**'''D5'6''' (16189) : 主に[[東アジア]]、[[東南アジア]]でみられ、特に[[漢民族]]で高い<ref name="Tanaka">Tanaka M et al. 2004, [http://genome.cshlp.org/content/14/10a/1832.full#aff-1 Mitochondrial Genome Variation in Eastern Asia and the Peopling of Japan] Genome Res. 2004. 14: 1832-1850</ref><ref name = "Peng2011">Min-Sheng Peng, Jun-Dong He, Hai-Xin Liu, Ya-Ping Zhang, "Tracing the legacy of the early Hainan Islanders - a perspective from mitochondrial DNA", ''BMC Evolutionary Biology'' 2011, 11:46. http://www.biomedcentral.com/1471-2148/11/46</ref><ref name = "Tabbada2010">Kristina A. Tabbada, Jean Trejaut, Jun-Hun Loo ''et al.'', "Philippine Mitochondrial DNA Diversity: A Populated Viaduct between Taiwan and Indonesia?", ''Mol. Biol. Evol.'' 27(1):21–31. (2010) doi:10.1093/molbev/msp215</ref> 。シベリア、中央アジア、[[インド]]東部でも低頻度でみられるが、下位系統のD5a2a2がシベリアの[[ヤクート]]でよくみられる<ref name = "Fedorova2013">Sardana A Fedorova, Maere Reidla, Ene Metspalu ''et al.'', "Autosomal and uniparental portraits of the native populations of Sakha (Yakutia): implications for the peopling of Northeast Eurasia", ''BMC Evolutionary Biology'' 2013, 13:127. http://www.biomedcentral.com/1471-2148/13/127</ref>。
 
 
 
{{MtDNA}}
 
 
 
==脚注==
 
<references />
 
 
 
{{Biosci-stub}}
 
 
 
{{デフォルトソート:はふろくるうふDみとこんとりあDNA}}
 
[[Category:遺伝学]]
 
[[Category:分子人類学]]
 
[[Category:日本人]]
 
[[Category:mtDNAハプログループ|D]]
 

2018/10/15/ (月) 23:43時点における最新版



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